Publications

Peer-reviewed journal articles, conference papers, and preprints. Co-first authors are marked with an asterisk (*).

Journal Papers

Disentangled Multi-modal Learning of Histology and Transcriptomics for Cancer Characterization

Disentangled Multi-modal Learning of Histology and Transcriptomics for Cancer Characterization

Yupei Zhang*, Xiaofei Wang*, Anran Liu, Lequan Yu, Chao Li†

IEEE Transactions on Medical Imaging, 2026

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Joint Modeling Histology and Molecular Markers for Cancer Classification

Joint Modeling Histology and Molecular Markers for Cancer Classification

Xiaofei Wang*, Hanyu Liu*, Yupei Zhang, Boyang Zhao, Hao Duan, Wanming Hu, Yonggao Mou, Stephen Price, Chao Li†

Medical Image Analysis, 2025

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Long-tailed Medical Diagnosis with Relation-aware Representation Learning and Iterative Classifier Calibration

Long-tailed Medical Diagnosis with Relation-aware Representation Learning and Iterative Classifier Calibration

Li Pan*, Yupei Zhang*, Qiushi Yang, Tan Li, Zhen Chen†

Computers in Biology and Medicine, 2025

Paper
Unified Multi-modal Diagnostic Framework with Reconstruction Pre-training and Heterogeneity-combat Tuning

Unified Multi-modal Diagnostic Framework with Reconstruction Pre-training and Heterogeneity-combat Tuning

Yupei Zhang*, Li Pan*, Qiushi Yang, Tan Li, Zhen Chen†

IEEE Journal of Biomedical and Health Informatics, 2024

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Facial Micro-Expression Recognition Using Double-Stream 3D Convolutional Neural Network with Domain Adaptation

Facial Micro-Expression Recognition Using Double-Stream 3D Convolutional Neural Network with Domain Adaptation

Zhengdao Li, Yupei Zhang, Hanwen Xing, Kwok-Leung Chan†

Sensors, 2023

Paper
Saliency Detection with Moving Camera via Background Model Completion

Saliency Detection with Moving Camera via Background Model Completion

Yupei Zhang, Kwok-Leung Chan†

Sensors, 2021

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Conference Papers

Focus on Focus: Focus-oriented Representation Learning and Multi-view Cross-modal Alignment for Glioma Grading

Focus on Focus: Focus-oriented Representation Learning and Multi-view Cross-modal Alignment for Glioma Grading

Li Pan*, Yupei Zhang*, Qiushi Yang, Tan Li, Xiaohan Xing, Maximus C. F. Yeung, Zhen Chen†

IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024

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Knowledge-driven Subspace Fusion and Gradient Coordination for Multi-modal Learning

Knowledge-driven Subspace Fusion and Gradient Coordination for Multi-modal Learning

Yupei Zhang*, Xiaofei Wang*, Fangliangzi Meng, Jin Tang, Chao Li†

Medical Image Computing and Computer Assisted Intervention (MICCAI), 2024

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Combat Long-tails in Medical Classification with Relation-aware Consistency and Virtual Features Compensation

Combat Long-tails in Medical Classification with Relation-aware Consistency and Virtual Features Compensation

Li Pan*, Yupei Zhang*, Qiushi Yang, Tan Li, Zhen Chen†

Medical Image Computing and Computer Assisted Intervention (MICCAI), 2023

PaperCode

Research on Phoneme Recognition using Attention-based Methods

Yupei Zhang†

International Conference on Computing and Pattern Recognition (ICCPR), 2022

Paper